A bench of Justices A M Khanwilkar and Sanjiv Khanna also transferred to Ajmer, Rajasthan all FIRs filed against Devgan in different states, including Maharashtra, Uttar Pradesh and Telangana.
The apex court had earlier granted Devgan protection from any coercive action in connection with the FIRs. Several FIRs were lodged against Devgan for describing the Sufi saint with a derogatory term in the news debate show called ''Aar Paar'' on his channel on June 15. Devgan later tweeted an apology saying he was actually referring to Muslim ruler Alauddin Khilji and inadvertently ended up naming Chisti.
Devgan through his lawyer Mrinal Bharti had moved the top court seeking the FIRs to be quashed saying it was a slip of the tongue and he had already expressed regret for the 'inadvertent" error.
He had told the apex court that "none of the FIRs said that public order was being disturbed".
Senior advocate Manish Singhvi, appearing for Rajasthan, had opposed Devgan's plea for quashing of the FIRs saying the investigation is the right of the police.
The apex court, while granting interim relief to Devgan, had also stayed the probe in the cases related to the telecast against the journalist. The journalist has said the plea concerned his life and liberty.
"In a well-orchestrated manner, the petitioner has been made a victim of country-wide filing of false and baseless criminal complaint and FIRs on the one hand, and on the other hand, petitioner, his family and his crew has been abused unabashedly on social media and by personal messages by unknown persons."
Devgan's plea also stated "The petitioner has also received several death threats from various anti-social elements".
It said that Devgan was holding a discussion on a petition filed before the top court on his show on June 15 on the issue of the Places of Worship Special Provisions Act.
"During the course of the live heated discussion one of the panelists quoted 'Chisti' (Hazrat Khwaja Moinuddin Chishti) and inadvertently, the petitioner (Devgan) who wanted to refer to the historical figure Khilji (Alauddin Khilji) as a marauder, mentioned the name 'Chisti'," the plea submitted.
Devgan also pleaded that immediately on realising his inadvertent slip of tongue during the heated debate in his show, he tendered a clarification that the name "Chisti' was mentioned by error and inadvertently.
Devgan tweeted the clarification on his personal Twitter account on the intervening night of June 16-17.
The channel also carried a video clarification featuring the journalist, the plea said.
The Sufi saint's dargah in Ajmer is an important pilgrimage centre and visited by thousands of people each day.